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Trinotate is a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms. 

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Running Instruction

Bugaboo: The executable file is called Trinotate. The required data by Trinotate is made according to the instruction in the website:
         and located in /usr/local/trinotate/data

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System Bugaboo
Version 3.0.1 2.0.2