Table of Contents

• Introduction
• Licensing and access
• Running Instructions

Introduction

SHRiMP is a software package for aligning genomic reads against a target genome. It was primarily developed with the multitudinous short reads of next generation sequencing machines in mind, as well as Applied Biosystem's colourspace genomic representation.

Restrictions / License Information

Redistribution and use in source and binary forms, with or without modification, are permitted provided that neither the names of the authors nor the names of any contributors are used to endorse or promote products derived from this software without specific prior written permission.

Running Instructions

See the README file.